STRINGSTRING
Solyc09g005980.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc09g005980.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc09g005980.2.1Uncharacterized protein (315 aa)    
Predicted Functional Partners:
Solyc02g085420.2.1
Uncharacterized protein (478 aa)
     
  0.973
Solyc10g009330.2.1
Uncharacterized protein (207 aa)
     
  0.965
Solyc01g091750.2.1
Uncharacterized protein (218 aa)
     
  0.965
Solyc04g074040.2.1
Uncharacterized protein (258 aa)
     
0.965
Solyc01g105140.2.1
Uncharacterized protein (254 aa)
     
0.965
Solyc09g075090.1.1
Uncharacterized protein (305 aa)
     
0.961
Solyc01g099810.2.1
Uncharacterized protein (264 aa)
     
0.961
Solyc06g009060.2.1
Uncharacterized protein (262 aa)
     
  0.958
Solyc03g026240.2.1
Uncharacterized protein (343 aa)
     
0.951
Solyc11g072340.1.1
Uncharacterized protein (354 aa)
     
0.950
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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