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Solyc09g007210.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc09g007210.2.1" - Spo11/DNA topoisomerase VI, subunit A protein in Solanum lycopersicum
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
Solyc09g007210.2.1Spo11/DNA topoisomerase VI, subunit A protein (268 aa)    
Predicted Functional Partners:
TOP6B
DNA topoisomerase 6 subunit B; Component of the DNA topoisomerase VI involved in chromatin organization and progression of endoreduplication cycles. Relaxes both positive and negative superturns and exhibits a strong decatenase activity. The B subunit binds ATP; Belongs to the TOP6B family (672 aa)
 
 
  0.991
101260519
Root hair initiation protein root hairless 1 (RHL1) (387 aa)
       
 
  0.951
101256852
Uncharacterized protein; Double-stranded DNA binding (400 aa)
     
   
  0.908
101255123
Protein kinase superfamily protein (1016 aa)
     
   
  0.877
101256634
Uncharacterized protein; Ataxia telangiectasia-mutated and RAD3-related (2728 aa)
       
 
  0.865
101256382
DNA repair-recombination protein (RAD50) (1316 aa)
     
 
  0.862
Solyc07g065430.2.1
annotation not available (383 aa)
   
     
  0.854
Solyc03g114040.2.1
Uncharacterized protein; Putative recombination initiation defect 1 (1341 aa)
       
 
  0.835
Solyc01g068350.2.1
annotation not available (214 aa)
     
 
  0.820
Solyc01g068340.2.1
annotation not available (515 aa)
     
 
  0.820
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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