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101260166 protein (Solanum lycopersicum) - STRING interaction network
"101260166" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101260166Uncharacterized protein; Zinc finger C-x8-C-x5-C-x3-H type family protein (374 aa)    
Predicted Functional Partners:
101255787
GTP-binding protein-related (368 aa)
     
 
  0.998
Solyc12g049270.1.1
annotation not available (368 aa)
     
 
  0.961
Solyc12g035420.1.1
annotation not available (167 aa)
     
 
  0.961
Solyc10g048050.1.1
annotation not available (107 aa)
     
 
  0.961
Solyc03g121980.2.1
annotation not available (387 aa)
     
 
  0.961
Solyc01g006800.2.1
Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val) (389 aa)
     
      0.888
POLR1B
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1096 aa)
     
      0.885
101258649
Uncharacterized protein; Sequence-specific DNA binding transcription factors (372 aa)
     
        0.867
101257451
annotation not available (344 aa)
     
        0.866
Solyc06g082580.2.1
annotation not available (303 aa)
     
      0.864
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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