• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Solyc09g007290.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc09g007290.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc09g007290.2.1annotation not available (129 aa)    
Predicted Functional Partners:
101265544
Uncharacterized protein; Nuclear factor Y, subunit C13 (144 aa)
     
 
  0.859
101246742
annotation not available (325 aa)
     
 
  0.855
CIP2b
CONSTANS interacting protein 2b (258 aa)
     
 
  0.790
101247294
annotation not available (253 aa)
     
 
  0.729
Solyc03g121940.2.1
annotation not available (241 aa)
     
 
  0.729
Solyc02g091030.2.1
annotation not available (677 aa)
     
 
  0.704
101257458
Uncharacterized protein; Relative of early flowering 6 (1252 aa)
     
 
  0.696
Solyc11g016920.1.1
annotation not available (138 aa)
     
 
  0.668
CIP2a
CONSTANS interacting protein 2a (232 aa)
     
 
  0.668
Solyc03g111470.1.1
annotation not available (273 aa)
     
 
  0.668
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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