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STRINGSTRING
101257890 protein (Solanum lycopersicum) - STRING interaction network
"101257890" - Ubiquitin-protein ligase 4 in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101257890Ubiquitin-protein ligase 4 (1553 aa)    
Predicted Functional Partners:
101261865
annotation not available (2043 aa)
     
 
  0.993
Solyc09g010830.2.1
annotation not available (1973 aa)
     
 
  0.993
Solyc06g074770.2.1
annotation not available (925 aa)
     
 
  0.981
Solyc02g088550.2.1
annotation not available (512 aa)
     
 
  0.981
Solyc04g082410.2.1
annotation not available (322 aa)
     
   
  0.967
101266480
Uncharacterized protein; Ubiquitin-specific protease 24; Belongs to the peptidase C19 family (534 aa)
     
 
  0.961
101257506
annotation not available (533 aa)
     
 
  0.961
101250941
Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII) (1642 aa)
     
 
  0.940
101256795
annotation not available (626 aa)
       
 
  0.912
Solyc07g065630.2.1
annotation not available (3757 aa)
     
   
0.912
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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