STRINGSTRING
Solyc09g007540.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc09g007540.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc09g007540.2.1Uncharacterized protein (1076 aa)    
Predicted Functional Partners:
Solyc07g008950.2.1
Uncharacterized protein (812 aa)
     
 
  0.933
Solyc11g018560.1.1
Uncharacterized protein (252 aa)
   
 
  0.912
Solyc12g098890.1.1
Uncharacterized protein (162 aa)
     
 
  0.910
Solyc09g020130.2.1
Uncharacterized protein (301 aa)
     
 
  0.910
Solyc06g082870.2.1
Uncharacterized protein (301 aa)
     
 
  0.910
Solyc06g007670.2.1
Uncharacterized protein (301 aa)
     
 
  0.910
Solyc05g007910.2.1
Uncharacterized protein (170 aa)
     
 
  0.910
Solyc06g071720.1.1
Uncharacterized protein (148 aa)
     
 
  0.909
Solyc05g009370.2.1
Uncharacterized protein (271 aa)
     
 
  0.909
Solyc03g112360.1.1
Uncharacterized protein (148 aa)
     
 
  0.909
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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