STRINGSTRING
Solyc09g007640.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc09g007640.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc09g007640.2.1annotation not available (503 aa)    
Predicted Functional Partners:
100736471
Ubiquitin-protein ligases (960 aa)
           
  0.763
101266536
Proteasome activating protein 200 (1813 aa)
           
  0.702
101262630
annotation not available (817 aa)
     
 
  0.701
101268481
Uncharacterized protein; Peptidase C78, ubiquitin fold modifier-specific peptidase 1/ 2 (423 aa)
           
  0.593
101256583
Uncharacterized protein; Carboxypeptidase D, putative (485 aa)
           
  0.593
Solyc03g083330.2.1
Prolyl oligopeptidase family protein (753 aa)
           
  0.593
Solyc03g045020.2.1
annotation not available (374 aa)
     
   
  0.579
Solyc03g044120.1.1
annotation not available (476 aa)
     
   
  0.579
Solyc12g049330.1.1
E3 Ubiquitin ligase family protein (365 aa)
           
  0.571
101247709
annotation not available (410 aa)
           
  0.567
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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