STRINGSTRING
PAL protein (Solanum lycopersicum) - STRING interaction network
"PAL" - Phenylalanine ammonia-lyase in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PALPhenylalanine ammonia-lyase ; This is a key enzyme of plant metabolism catalyzing the first reaction in the biosynthesis from L-phenylalanine of a wide variety of natural products based on the phenylpropane skeleton (721 aa)    
Predicted Functional Partners:
Solyc07g008360.1.1
Uncharacterized protein (568 aa)
   
 
  0.941
Solyc06g068650.2.1
Uncharacterized protein (543 aa)
   
 
  0.941
Solyc03g117870.2.1
Uncharacterized protein (545 aa)
   
 
  0.941
Solyc11g069050.1.1
Uncharacterized protein (538 aa)
       
  0.936
Solyc03g097030.2.1
Uncharacterized protein (570 aa)
   
 
  0.913
Solyc12g042460.1.1
Uncharacterized protein (548 aa)
       
  0.912
Solyc08g076300.2.1
Uncharacterized protein (574 aa)
       
  0.912
Solyc02g088710.2.1
Uncharacterized protein (553 aa)
       
  0.912
Solyc10g075170.1.1
Uncharacterized protein (368 aa)
         
  0.906
Solyc08g068330.2.1
Aspartate aminotransferase (452 aa)
         
  0.906
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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