STRINGSTRING
Solyc09g007940.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc09g007940.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc09g007940.2.1Uncharacterized protein (340 aa)    
Predicted Functional Partners:
Solyc10g005310.2.1
Uncharacterized protein (366 aa)
       
  0.982
Solyc07g006530.2.1
Adenylosuccinase (546 aa)
   
  0.977
Solyc09g014770.2.1
Uncharacterized protein (832 aa)
       
  0.956
Solyc05g006910.2.1
Uncharacterized protein (886 aa)
       
  0.956
Solyc12g010380.1.1
Uncharacterized protein (606 aa)
   
 
  0.947
Solyc09g007180.2.1
Uncharacterized protein (281 aa)
   
 
  0.947
Solyc06g065270.2.1
Uncharacterized protein (286 aa)
   
 
  0.947
Solyc05g014980.2.1
Uncharacterized protein (242 aa)
   
 
  0.947
Solyc04g049690.2.1
Uncharacterized protein (269 aa)
   
 
  0.947
Solyc03g111200.2.1
Uncharacterized protein (244 aa)
   
 
  0.947
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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