STRINGSTRING
Solyc09g008230.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc09g008230.2.1" - COSII_At2g36930 in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc09g008230.2.1COSII_At2g36930 (120 aa)    
Predicted Functional Partners:
Solyc09g098360.2.1
Uncharacterized protein (260 aa)
     
 
  0.941
Solyc12g038980.1.1
Uncharacterized protein (155 aa)
     
 
  0.925
Solyc01g104470.2.1
Uncharacterized protein (229 aa)
     
 
  0.923
Solyc11g066630.1.1
Uncharacterized protein (145 aa)
     
      0.920
Solyc06g074720.2.1
Uncharacterized protein (219 aa)
     
      0.920
Solyc07g063280.1.1
Uncharacterized protein (123 aa)
     
 
  0.919
Solyc07g063270.2.1
Uncharacterized protein (516 aa)
     
 
  0.919
Solyc09g090460.2.1
Uncharacterized protein (440 aa)
     
 
  0.918
Solyc07g053730.2.1
Nucleolar GTP-binding protein 1 ; Involved in the biogenesis of the 60S ribosomal subunit (689 aa)
     
 
  0.918
Solyc01g081010.2.1
Nucleolar GTP-binding protein 1 ; Involved in the biogenesis of the 60S ribosomal subunit (696 aa)
     
 
  0.918
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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