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STRINGSTRING
101258588 protein (Solanum lycopersicum) - STRING interaction network
"101258588" - ACT-like superfamily protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101258588ACT-like superfamily protein (411 aa)    
Predicted Functional Partners:
Solyc06g011520.2.1
ACT-like superfamily protein (418 aa)
           
  0.927
Solyc02g092150.2.1
Uncharacterized protein; ACT domain repeat 1 (540 aa)
           
  0.763
101249372
annotation not available (283 aa)
           
  0.739
101249904
annotation not available (287 aa)
           
  0.739
101244297
Uncharacterized protein; ACT domain repeat 3 (447 aa)
     
   
  0.723
101268798
Unknown protein; BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT1G16520.1); Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eu /.../es - 2996 (source- NCBI BLink) (329 aa)
           
  0.695
101259744
annotation not available (449 aa)
     
   
  0.619
Solyc02g094300.2.1
Uncharacterized protein; ACT domain repeat 6 (363 aa)
     
   
  0.619
101260963
annotation not available (448 aa)
     
   
  0.619
101249096
Mitochondrial 28S ribosomal protein S29-related (452 aa)
           
  0.600
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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