• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
101255621 protein (Solanum lycopersicum) - STRING interaction network
"101255621" - Hydroxyproline-rich glycoprotein family protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101255621Hydroxyproline-rich glycoprotein family protein (345 aa)    
Predicted Functional Partners:
101254575
Uncharacterized protein; Splicing factor-related (509 aa)
     
  0.998
Solyc04g005690.2.1
annotation not available (768 aa)
     
  0.991
Solyc02g081960.2.1
annotation not available (769 aa)
     
  0.991
Solyc07g054200.2.1
Uncharacterized protein; pre-mRNA splicing factor-related (753 aa)
     
 
  0.989
101247104
annotation not available (110 aa)
     
 
  0.987
101258326
annotation not available (177 aa)
     
 
  0.987
Solyc10g081990.1.1
annotation not available (102 aa)
     
 
  0.987
101244943
Uncharacterized protein; RNA-binding (RRM/RBD/RNP motifs) family protein (364 aa)
     
 
  0.987
101246377
annotation not available (109 aa)
     
 
  0.985
101248760
U2 small nuclear ribonucleoprotein A (286 aa)
     
 
  0.983
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (9%) [HD]