STRINGSTRING
Solyc09g008480.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc09g008480.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc09g008480.2.1Uncharacterized protein (813 aa)    
Predicted Functional Partners:
Solyc11g005910.1.1
Uncharacterized protein (1134 aa)
     
  0.978
Solyc10g076710.1.1
PI-phospholipase C PLC1 (601 aa)
     
  0.976
Solyc06g082000.2.1
PI-phospholipase C PLC6 (566 aa)
     
  0.976
PLC5
PI-phospholipase C PLC5 (593 aa)
     
  0.976
Solyc06g051620.2.1
PI-phospholipase C PLC2 (565 aa)
     
  0.976
Solyc06g007120.2.1
PI-phospholipase C PLC4 (587 aa)
     
  0.976
Solyc05g052760.2.1
PI-phospholipase C PLC3 (583 aa)
     
  0.976
Solyc03g013310.2.1
Uncharacterized protein (413 aa)
     
  0.936
Solyc02g093000.2.1
Uncharacterized protein (453 aa)
     
  0.936
Solyc01g107750.2.1
Uncharacterized protein (619 aa)
     
  0.936
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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