STRINGSTRING
TD protein (Solanum lycopersicum) - STRING interaction network
"TD" - Threonine dehydratase biosynthetic, chloroplastic in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TDThreonine dehydratase biosynthetic, chloroplastic (595 aa)    
Predicted Functional Partners:
Solyc07g061940.2.1
Uncharacterized protein (516 aa)
 
  0.973
Solyc03g044330.1.1
Acetolactate synthase (659 aa)
 
  0.973
Solyc06g059880.2.1
Acetolactate synthase (650 aa)
 
  0.973
Solyc12g019310.1.1
Uncharacterized protein (415 aa)
   
 
  0.963
Solyc11g008780.1.1
Uncharacterized protein (490 aa)
   
 
  0.963
Solyc06g062840.2.1
Uncharacterized protein (522 aa)
   
 
  0.952
Solyc03g121910.1.1
Uncharacterized protein (519 aa)
   
 
  0.952
Solyc05g009030.2.1
3-isopropylmalate dehydrogenase ; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate (406 aa)
   
 
  0.950
Solyc10g018390.1.1
Uncharacterized protein (455 aa)
     
 
  0.933
Solyc10g006400.2.1
Uncharacterized protein (468 aa)
     
 
  0.933
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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