STRINGSTRING
Solyc09g008790.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc09g008790.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc09g008790.2.1Uncharacterized protein (554 aa)    
Predicted Functional Partners:
Solyc11g072340.1.1
Uncharacterized protein (354 aa)
     
 
  0.936
Solyc10g009330.2.1
Uncharacterized protein (207 aa)
     
 
  0.936
Solyc03g026240.2.1
Uncharacterized protein (343 aa)
     
 
  0.936
Solyc01g096180.2.1
Uncharacterized protein (245 aa)
     
 
  0.936
Solyc01g091750.2.1
Uncharacterized protein (218 aa)
     
 
  0.936
cdc5
CDC5-like protein (987 aa)
     
 
  0.913
Solyc02g078970.2.1
Uncharacterized protein (570 aa)
     
 
  0.910
Solyc11g067010.1.1
Uncharacterized protein (117 aa)
     
 
  0.904
Solyc09g009300.2.1
Uncharacterized protein (197 aa)
     
 
  0.904
Solyc09g090660.2.1
Uncharacterized protein (521 aa)
     
 
  0.903
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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