STRINGSTRING
Solyc09g009110.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc09g009110.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc09g009110.2.1Uncharacterized protein (378 aa)    
Predicted Functional Partners:
GA2ox1
Gibberellin 2-oxidase (349 aa)
   
   
 
0.914
Solyc08g016660.1.1
Uncharacterized protein (354 aa)
   
   
 
0.913
Solyc01g058250.1.1
Uncharacterized protein (348 aa)
   
   
 
0.913
GA2ox3
Gibberellin 2-oxidase (344 aa)
   
   
 
0.913
Solyc02g070430.2.1
Uncharacterized protein (341 aa)
   
   
 
0.913
Solyc10g005360.2.1
Uncharacterized protein (289 aa)
   
   
 
0.912
Solyc00g007180.1.1
Annotation not available (349 aa)
   
   
 
0.912
Solyc05g052740.1.1
Uncharacterized protein (349 aa)
   
   
 
0.912
Solyc02g080120.1.1
Uncharacterized protein (380 aa)
   
   
 
0.911
GA2ox4
Gibberellin 2-oxidase (331 aa)
   
   
 
0.911
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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