STRINGSTRING
Solyc09g009180.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc09g009180.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc09g009180.2.1Uncharacterized protein (686 aa)    
Predicted Functional Partners:
Solyc11g065690.1.1
Uncharacterized protein (342 aa)
     
  0.996
Solyc01g008470.2.1
Uncharacterized protein (359 aa)
     
  0.996
Solyc10g007390.2.1
Uncharacterized protein (475 aa)
     
  0.986
Solyc02g072130.2.1
Uncharacterized protein (475 aa)
     
  0.986
Solyc03g096240.1.1
Uncharacterized protein (110 aa)
     
  0.984
Solyc06g010060.1.1
Uncharacterized protein (112 aa)
     
  0.982
Solyc03g116990.1.1
Uncharacterized protein (109 aa)
     
  0.982
Solyc09g065120.2.1
Uncharacterized protein (576 aa)
     
  0.943
Solyc07g006520.2.1
Uncharacterized protein (536 aa)
     
  0.943
Solyc07g008880.2.1
Uncharacterized protein (2384 aa)
     
  0.891
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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