STRINGSTRING
Solyc09g009270.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc09g009270.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc09g009270.1.1Uncharacterized protein (404 aa)    
Predicted Functional Partners:
Solyc03g031750.1.1
Uncharacterized protein (209 aa)
     
  0.976
Solyc02g080270.2.1
Uncharacterized protein (274 aa)
     
  0.976
Solyc10g085810.1.1
Uncharacterized protein (234 aa)
     
  0.974
Solyc10g083780.1.1
Uncharacterized protein (233 aa)
     
  0.974
Solyc06g031690.2.1
Uncharacterized protein (101 aa)
       
  0.971
Solyc02g079850.2.1
Uncharacterized protein (979 aa)
       
  0.971
Solyc00g183050.1.1
Annotation not available (39 aa)
       
  0.971
Solyc01g096910.2.1
Uncharacterized protein (438 aa)
       
  0.970
Solyc05g008430.2.1
Uncharacterized protein (888 aa)
     
  0.852
Solyc04g007560.2.1
Uncharacterized protein (908 aa)
     
  0.852
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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