STRINGSTRING
Solyc09g009460.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc09g009460.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc09g009460.2.1Uncharacterized protein (137 aa)    
Predicted Functional Partners:
Solyc11g065640.1.1
Uncharacterized protein (216 aa)
 
 
  0.856
Solyc01g008460.2.1
Uncharacterized protein (207 aa)
 
 
  0.853
Solyc06g048540.2.1
Uncharacterized protein (312 aa)
   
 
  0.825
Solyc12g015910.1.1
Uncharacterized protein (353 aa)
   
 
  0.753
Solyc11g068430.1.1
Putative ferredoxin (124 aa)
   
 
  0.740
Solyc11g006910.1.1
Uncharacterized protein (125 aa)
   
 
  0.740
Solyc10g075160.1.1
Ferredoxin II (144 aa)
   
 
  0.740
SEND33
Ferredoxin-1, chloroplastic ; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions (144 aa)
   
 
  0.740
Solyc08g083360.2.1
Uncharacterized protein (192 aa)
   
 
  0.740
Solyc08g077050.2.1
Uncharacterized protein (191 aa)
   
 
  0.740
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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