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STRINGSTRING
Solyc09g009460.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc09g009460.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc09g009460.2.1annotation not available (137 aa)    
Predicted Functional Partners:
101246790
annotation not available (216 aa)
 
 
  0.744
101265666
annotation not available (207 aa)
 
 
  0.741
101265463
Glycine cleavage T-protein family (401 aa)
   
 
  0.720
101261847
Uncharacterized protein; DNAJ heat shock N-terminal domain-containing protein (267 aa)
   
 
  0.716
101247165
Uncharacterized protein; Iron-sulphur cluster biosynthesis family protein (160 aa)
   
   
  0.680
Solyc07g007450.2.1
Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron- sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins (164 aa)
   
   
  0.680
101252070
Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron- sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins (166 aa)
   
   
  0.680
101252187
2Fe-2S ferredoxin-like superfamily protein (161 aa)
   
 
  0.668
101265146
Uncharacterized protein; Frataxin homolog (194 aa)
     
   
  0.654
101249958
annotation not available (725 aa)
     
   
  0.653
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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