STRINGSTRING
Solyc09g009630.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc09g009630.2.1" - Uncharacterized protein in Solanum lycopersicum
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc09g009630.2.1Uncharacterized protein (318 aa)    
Predicted Functional Partners:
Solyc04g009010.1.1
Protein-S-isoprenylcysteine O-methyltransferase (197 aa)
       
  0.952
FTB
Farnesyl-protein transferase beta subunit (457 aa)
       
  0.943
FTA
Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha ; Essential subunit of both the farnesyltransferase and the geranylgeranyltransferase complex. Contributes to the transfer of a farnesyl or geranylgeranyl moiety from farnesyl or geranylgeranyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins having the C-terminal sequence Cys-aliphatic-aliphatic-X (346 aa)
     
 
  0.936
Solyc05g010050.2.1
Uncharacterized protein (464 aa)
         
  0.928
Solyc02g065590.2.1
Uncharacterized protein (257 aa)
         
  0.906
Solyc01g094930.2.1
Uncharacterized protein (424 aa)
       
 
  0.602
Solyc07g007700.1.1
Uncharacterized protein (400 aa)
       
 
  0.545
Solyc12g096430.1.1
Uncharacterized protein (622 aa)
         
  0.526
Solyc10g047480.1.1
Uncharacterized protein (480 aa)
         
  0.526
Solyc09g017990.1.1
Uncharacterized protein (477 aa)
         
  0.526
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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