STRINGSTRING
Solyc09g009680.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc09g009680.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc09g009680.2.1Uncharacterized protein (566 aa)    
Predicted Functional Partners:
Solyc06g065700.2.1
Uncharacterized protein (685 aa)
     
  0.991
Solyc04g010090.2.1
Uncharacterized protein (161 aa)
     
  0.991
Solyc12g096470.1.1
Uncharacterized protein (138 aa)
     
  0.990
Solyc02g078300.2.1
Uncharacterized protein (128 aa)
       
  0.990
Solyc07g006820.2.1
Uncharacterized protein (1823 aa)
     
  0.990
Solyc04g078050.2.1
Uncharacterized protein (934 aa)
     
  0.983
Solyc01g028930.2.1
Uncharacterized protein (203 aa)
       
  0.978
Solyc05g018120.1.1
Uncharacterized protein (210 aa)
     
  0.976
Solyc05g010570.2.1
Uncharacterized protein (170 aa)
     
  0.976
Solyc10g006100.2.1
Uncharacterized protein (547 aa)
     
  0.976
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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