STRINGSTRING
Solyc09g009940.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc09g009940.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc09g009940.2.1Uncharacterized protein (567 aa)    
Predicted Functional Partners:
Solyc02g087400.1.1
Uncharacterized protein (368 aa)
     
 
  0.980
Solyc08g082740.2.1
Uncharacterized protein (213 aa)
     
  0.979
Solyc01g091580.2.1
Uncharacterized protein (368 aa)
 
0.976
Solyc04g048930.1.1
Uncharacterized protein (81 aa)
     
  0.974
Solyc03g093970.2.1
Signal recognition particle subunit SRP68 ; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane (602 aa)
     
  0.974
Solyc02g062840.1.1
Uncharacterized protein (97 aa)
     
  0.974
Solyc02g062830.1.1
Uncharacterized protein (149 aa)
     
  0.974
Solyc02g062810.2.1
Signal recognition particle subunit SRP68 ; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane (602 aa)
     
  0.974
Solyc12g099820.1.1
Signal recognition particle 9 kDa protein ; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane. SRP9 together with SRP14 and the Alu portion of the SRP RNA, constitutes the elongation arrest domain of SRP. The complex of SRP9 and SRP14 is required for SRP RNA binding (103 aa)
     
  0.974
Solyc12g009990.1.1
Uncharacterized protein (619 aa)
 
0.967
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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