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lin5 protein (Solanum lycopersicum) - STRING interaction network
"lin5" - Beta-fructofuranosidase in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lin5Beta-fructofuranosidase; Cell-wall invertase (584 aa)    
Predicted Functional Partners:
FRK2
Fructokinase-2 ; May play an important role in maintaining the flux of carbon towards starch formation (328 aa)
 
   
  0.965
Frk1
Fructokinase (347 aa)
 
   
  0.962
LOC543890
Fructokinase 3 (389 aa)
 
   
  0.961
FRK4
Fructokinase (375 aa)
 
   
  0.960
Solyc11g042850.1.1
Uncharacterized protein (325 aa)
 
   
  0.959
Solyc03g098290.2.1
Sucrose synthase ; Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways (891 aa)
          
  0.935
Solyc02g081300.2.1
Sucrose synthase ; Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways (884 aa)
          
  0.935
hxk1
Hexokinase (498 aa)
          
  0.932
HXK3
Hexokinase (499 aa)
          
  0.922
Solyc11g065220.1.1
Phosphotransferase (511 aa)
          
  0.922
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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