STRINGSTRING
Solyc09g010670.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc09g010670.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc09g010670.2.1Uncharacterized protein (195 aa)    
Predicted Functional Partners:
RBR1
Retinoblastoma-related protein 1 (1018 aa)
     
  0.997
Solyc04g081350.2.1
Uncharacterized protein (397 aa)
     
  0.981
Solyc11g068800.1.1
Uncharacterized protein (449 aa)
     
  0.981
Solyc06g074010.2.1
Uncharacterized protein (847 aa)
     
  0.981
Solyc01g007760.2.1
Uncharacterized protein (479 aa)
     
  0.981
Solyc07g009140.2.1
Uncharacterized protein (386 aa)
       
      0.902
Solyc01g097050.2.1
Uncharacterized protein (165 aa)
       
      0.902
Solyc08g075360.1.1
Uncharacterized protein (606 aa)
       
      0.867
Solyc07g008340.2.1
Uncharacterized protein (578 aa)
       
      0.867
cdc2A-1
Cyclin-dependent protein kinase p34cdc2 (294 aa)
     
  0.751
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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