STRINGSTRING
Solyc09g010720.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc09g010720.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc09g010720.2.1Uncharacterized protein (937 aa)    
Predicted Functional Partners:
Solyc09g009640.2.1
Uncharacterized protein (99 aa)
       
      0.567
Solyc09g065940.2.1
Uncharacterized protein (136 aa)
       
      0.487
Solyc01g099740.2.1
Uncharacterized protein (151 aa)
       
      0.487
Solyc10g079720.1.1
Uncharacterized protein (469 aa)
       
      0.431
Solyc08g083110.2.1
Uncharacterized protein (444 aa)
       
      0.431
Solyc08g066620.2.1
Uncharacterized protein (128 aa)
       
      0.431
Solyc08g008580.2.1
Uncharacterized protein (447 aa)
       
      0.431
LOC543920
Cystathionine gamma synthase (540 aa)
       
      0.431
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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