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LOC778298 protein (Solanum lycopersicum) - STRING interaction network
"LOC778298" - Metallothionein-like protein type 2 B in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC778298Metallothionein-like protein type 2 B; Metallothioneins have a high content of cysteine residues that bind various heavy metals (82 aa)    
Predicted Functional Partners:
LeNramp2
Uncharacterized protein; Putative metal transporter Nramp2 (519 aa)
           
  0.798
CHLN
Nicotianamine synthase; Synthesizes nicotianamine, a polyamine that serves as a sensor for the physiological iron status within the plant, and/or might be involved in the transport of iron (317 aa)
           
  0.798
NRAMP1
Root-specific metal transporter (530 aa)
           
  0.730
101265663
Uncharacterized protein; YELLOW STRIPE like 1 (663 aa)
           
  0.730
NRAMP3
Metal transporter (509 aa)
           
  0.720
101247598
annotation not available (355 aa)
     
        0.715
101253969
annotation not available (345 aa)
     
        0.715
101253659
annotation not available (378 aa)
     
        0.715
101261619
Uncharacterized protein; Heavy metal transport/detoxification superfamily protein (150 aa)
           
  0.697
101264080
Uncharacterized protein; AMMECR1 family (209 aa)
     
        0.690
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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