STRINGSTRING
Solyc09g011060.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc09g011060.2.1" - Clade IV lectin receptor kinase in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc09g011060.2.1Clade IV lectin receptor kinase (832 aa)    
Predicted Functional Partners:
Solyc12g056940.1.1
Uncharacterized protein (2210 aa)
   
  0.980
Solyc02g078970.2.1
Uncharacterized protein (570 aa)
     
  0.975
Solyc09g090660.2.1
Uncharacterized protein (521 aa)
     
  0.973
Solyc07g008880.2.1
Uncharacterized protein (2384 aa)
     
  0.964
Solyc06g043160.1.1
Uncharacterized protein (52 aa)
     
  0.964
Solyc09g008470.2.1
Uncharacterized protein (345 aa)
       
  0.961
Solyc10g081290.1.1
Uncharacterized protein (207 aa)
     
  0.960
Solyc10g081090.1.1
Uncharacterized protein (127 aa)
     
  0.960
Solyc10g081070.1.1
Uncharacterized protein (684 aa)
     
  0.960
Solyc07g041790.1.1
Uncharacterized protein (73 aa)
     
  0.960
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (10%) [HD]