STRINGSTRING
Solyc09g011210.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc09g011210.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc09g011210.2.1Uncharacterized protein (132 aa)    
Predicted Functional Partners:
Solyc01g006940.2.1
Uncharacterized protein (328 aa)
   
          0.526
Solyc08g076840.2.1
Uncharacterized protein (285 aa)
   
          0.524
Solyc09g065080.1.1
Uncharacterized protein (225 aa)
   
          0.513
Solyc04g074750.2.1
Uncharacterized protein (278 aa)
   
          0.510
Solyc04g005350.2.1
Uncharacterized protein (167 aa)
   
          0.505
Solyc01g005820.2.1
Uncharacterized protein (252 aa)
   
          0.487
Solyc02g083320.2.1
Uncharacterized protein (228 aa)
   
          0.486
Solyc06g062740.1.1
Uncharacterized protein (197 aa)
   
          0.469
Solyc08g074790.2.1
Eukaryotic translation initiation factor 3 subunit 4 (295 aa)
   
          0.418
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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