STRINGSTRING
TIM10 protein (Solanum lycopersicum) - STRING interaction network
"TIM10" - Small zinc finger-like protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TIM10Small zinc finger-like protein (81 aa)    
Predicted Functional Partners:
Solyc10g086510.1.1
Uncharacterized protein (93 aa)
     
  0.996
Solyc08g048070.1.1
Uncharacterized protein (67 aa)
     
  0.995
Solyc08g083380.2.1
Uncharacterized protein (88 aa)
     
 
  0.985
Solyc04g008770.2.1
Uncharacterized protein (153 aa)
     
  0.893
Solyc11g068980.1.1
Uncharacterized protein (169 aa)
     
  0.866
Solyc10g078690.1.1
Uncharacterized protein (208 aa)
     
  0.866
Solyc06g072600.2.1
Uncharacterized protein (78 aa)
     
 
  0.842
Solyc03g097640.2.1
Uncharacterized protein (76 aa)
     
 
  0.842
Solyc11g062190.1.1
Uncharacterized protein (383 aa)
     
  0.800
LOC544050
ADP/ATP translocator (386 aa)
     
  0.800
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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