STRINGSTRING
Solyc09g014590.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc09g014590.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc09g014590.2.1Uncharacterized protein (312 aa)    
Predicted Functional Partners:
Solyc11g016930.1.1
Uncharacterized protein (197 aa)
   
          0.522
Solyc01g013880.1.1
Uncharacterized protein (129 aa)
   
          0.514
Solyc01g014150.1.1
Uncharacterized protein (219 aa)
   
          0.511
Solyc01g012690.1.1
Uncharacterized protein (113 aa)
   
          0.511
Solyc10g051250.1.1
Uncharacterized protein (102 aa)
   
          0.510
Solyc04g076460.2.1
Uncharacterized protein (369 aa)
   
          0.496
Solyc01g014310.1.1
Uncharacterized protein (157 aa)
   
          0.462
Solyc06g006060.1.1
Uncharacterized protein (79 aa)
   
          0.459
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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