STRINGSTRING
Solyc09g014770.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc09g014770.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc09g014770.2.1Uncharacterized protein (832 aa)    
Predicted Functional Partners:
Solyc08g079020.2.1
Uncharacterized protein (182 aa)
     
  0.966
Solyc04g077970.2.1
Uncharacterized protein (266 aa)
     
  0.966
Solyc10g086190.1.1
Uncharacterized protein (339 aa)
       
  0.956
Solyc09g007940.2.1
Uncharacterized protein (340 aa)
       
  0.956
Solyc00g009060.2.1
Annotation not available (199 aa)
   
 
  0.949
Solyc10g080320.1.1
Adenylosuccinate synthetase ; Plays an important role in the de novo pathway of purine nucleotide biosynthesis (507 aa)
   
 
  0.944
Solyc02g085520.2.1
Adenylosuccinate synthetase ; Plays an important role in the de novo pathway of purine nucleotide biosynthesis (581 aa)
   
 
  0.944
Solyc10g079500.1.1
Inosine-5’-monophosphate dehydrogenase (497 aa)
   
  0.937
Solyc07g006530.2.1
Adenylosuccinase (546 aa)
     
 
  0.931
Solyc12g010380.1.1
Uncharacterized protein (606 aa)
         
  0.929
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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