• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Solyc09g015000.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc09g015000.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc09g015000.2.1annotation not available (134 aa)    
Predicted Functional Partners:
HSP21
Small heat shock protein, chloroplastic (235 aa)
   
   
  0.778
Solyc06g082560.1.1
annotation not available (854 aa)
   
 
  0.641
101254583
annotation not available (911 aa)
   
 
  0.641
101260554
HSP20-like chaperones superfamily protein; Belongs to the small heat shock protein (HSP20) family (188 aa)
           
  0.586
101255139
Major facilitator superfamily protein; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family (465 aa)
       
 
  0.583
101251952
Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family (245 aa)
           
  0.570
101252901
Heat shock protein 70 (Hsp 70) family protein (890 aa)
   
 
  0.567
Solyc05g013360.2.1
Uncharacterized protein; Poor homologous synapsis 1 (304 aa)
           
  0.550
101265903
annotation not available (846 aa)
   
 
  0.543
101266200
annotation not available (852 aa)
   
 
  0.543
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (8%) [HD]