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STRINGSTRING
101266549 protein (Solanum lycopersicum) - STRING interaction network
"101266549" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
101266549Uncharacterized protein; CONTAINS InterPro DOMAIN/s- Galactose oxidase/kelch, beta-propeller (InterPro-IPR011043), Kelch repeat type 1 (InterPro-IPR006652), Development/cell death domain (InterPro-IPR013989), Kelch related (InterPro-IPR013089), Kelch-type beta propeller (In /.../-IPR015915); BEST Arabidopsis thaliana protein match is- DCD (Development and Cell Death) domain protein (TAIR-AT3G11000.1); Has 16133 Blast hits to 7053 proteins in 482 species- Archae - 40; Bacteria - 1227; Metazoa - 10756; Fungi - 311; Plants - 1896; Viruses - 673; Other Eukaryotes - 1230 (source- NCBI BLink) (643 aa)
 
Sorry, there are no predicted associations at the current settings.
 
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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