STRINGSTRING
Solyc09g015300.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc09g015300.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc09g015300.1.1Uncharacterized protein (118 aa)    
Predicted Functional Partners:
Solyc12g033040.1.1
Uncharacterized protein (185 aa)
 
          0.622
Solyc01g017330.1.1
Uncharacterized protein (138 aa)
 
          0.577
Solyc12g033060.1.1
Uncharacterized protein (273 aa)
 
          0.543
Solyc10g017900.1.1
Uncharacterized protein (141 aa)
 
          0.529
Solyc12g032960.1.1
Uncharacterized protein (84 aa)
   
          0.526
psaA
Photosystem I P700 apoprotein A1; PsaA and PsaB bind P700, the primary electron donor of photosystem I (PSI), as well as the electron acceptors A0, A1 and FX. PSI is a plastocyanin-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized acceptors A0, A1, FX, FA and FB in turn. Oxidized P700 is reduced on the lumenal side of the thylakoid membrane by plastocyanin (135 aa)
   
          0.526
Solyc09g015280.1.1
Uncharacterized protein (149 aa)
   
          0.525
Solyc00g245200.1.1
Annotation not available (61 aa)
   
          0.525
Solyc09g059640.1.1
Uncharacterized protein (112 aa)
   
          0.524
Solyc01g018090.1.1
Uncharacterized protein (99 aa)
   
          0.524
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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