STRINGSTRING
Solyc09g015330.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc09g015330.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc09g015330.1.1Uncharacterized protein (176 aa)    
Predicted Functional Partners:
rps3
30S ribosomal protein S3, chloroplastic (352 aa)
   
  0.999
Solyc11g021130.1.1
Ribosomal protein S7 (285 aa)
   
  0.999
rps8
30S ribosomal protein S8, chloroplastic ; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit (134 aa)
 
  0.998
Solyc08g061960.2.1
Uncharacterized protein (238 aa)
   
  0.998
Solyc08g061850.2.1
Uncharacterized protein (250 aa)
   
  0.998
Solyc07g041310.2.1
Uncharacterized protein (239 aa)
   
  0.998
Solyc11g020890.1.1
Uncharacterized protein (56 aa)
   
  0.998
Solyc06g073430.2.1
Uncharacterized protein (56 aa)
   
  0.998
Solyc04g049260.1.1
Uncharacterized protein (166 aa)
   
  0.998
Solyc04g074300.2.1
Uncharacterized protein (280 aa)
   
  0.998
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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