STRINGSTRING
Solyc09g015470.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc09g015470.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc09g015470.2.1Uncharacterized protein (465 aa)    
Predicted Functional Partners:
Solyc11g066870.1.1
Uncharacterized protein (841 aa)
     
   
  0.545
Solyc05g054720.2.1
Uncharacterized protein (271 aa)
     
   
  0.535
Solyc04g076740.2.1
Uncharacterized protein (271 aa)
     
   
  0.535
ycf1
Putative membrane protein ycf1 (393 aa)
           
  0.532
Solyc10g062330.1.1
Uncharacterized protein (301 aa)
           
  0.532
Solyc04g045540.1.1
Uncharacterized protein (291 aa)
           
  0.532
Solyc06g007340.2.1
Uncharacterized protein (254 aa)
           
  0.455
Solyc06g007330.2.1
Uncharacterized protein (237 aa)
           
  0.455
Solyc10g076330.1.1
Uncharacterized protein (601 aa)
           
  0.434
Solyc09g015120.2.1
Uncharacterized protein (643 aa)
           
  0.434
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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