STRINGSTRING
Solyc09g015670.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc09g015670.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc09g015670.2.1Uncharacterized protein (621 aa)    
Predicted Functional Partners:
CYP-3
Cysteine proteinase 3 (356 aa)
       
 
  0.688
Solyc05g013050.2.1
Uncharacterized protein (221 aa)
       
 
  0.498
Solyc03g115760.2.1
Uncharacterized protein (221 aa)
       
 
  0.498
Solyc04g064820.2.1
Uncharacterized protein (568 aa)
       
 
  0.483
Solyc03g113020.2.1
Vacuolar protein sorting-associated protein 29 (189 aa)
           
  0.468
Solyc12g089340.1.1
Vacuolar protein sorting-associated protein 35 ; Plays a role in vesicular protein sorting (791 aa)
     
   
  0.433
Solyc03g033400.2.1
Vacuolar protein sorting-associated protein 35 ; Plays a role in vesicular protein sorting (790 aa)
     
   
  0.433
Solyc02g083560.2.1
Vacuolar protein sorting-associated protein 35 ; Plays a role in vesicular protein sorting (790 aa)
     
   
  0.433
Solyc11g070110.1.1
Uncharacterized protein (546 aa)
       
 
  0.423
Solyc08g065890.2.1
Uncharacterized protein (551 aa)
       
 
  0.423
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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