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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Solyc09g018200.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc09g018200.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc09g018200.1.1annotation not available (251 aa)    
Predicted Functional Partners:
101260670
Uncharacterized protein; KU70 homolog (624 aa)
       
 
  0.855
THox2
Homeobox 2 protein (310 aa)
       
 
  0.825
101262405
Ovate family protein 14 (275 aa)
           
  0.739
101249302
Ovate family protein 11 (211 aa)
           
  0.638
LOC543847
Ovate protein (278 aa)
           
  0.638
Solyc06g082450.1.1
annotation not available (188 aa)
           
  0.620
104648974
annotation not available (174 aa)
           
  0.620
Solyc11g006670.1.1
annotation not available (244 aa)
           
  0.456
104645444
annotation not available (298 aa)
           
  0.456
101261811
annotation not available (661 aa)
       
 
  0.441
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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