STRINGSTRING
Solyc09g018780.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc09g018780.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc09g018780.2.1Uncharacterized protein (100 aa)    
Predicted Functional Partners:
Solyc10g084160.1.1
Uncharacterized protein (497 aa)
     
  0.868
Solyc04g064560.2.1
Uncharacterized protein (567 aa)
     
  0.868
Solyc06g082810.2.1
Uncharacterized protein (230 aa)
   
   
 
0.801
Solyc09g018760.2.1
Uncharacterized protein (155 aa)
   
          0.526
Solyc00g030210.1.1
Annotation not available (1147 aa)
   
     
  0.482
Solyc10g018520.1.1
Uncharacterized protein (861 aa)
       
 
  0.423
Solyc07g052340.2.1
Uncharacterized protein (884 aa)
       
 
  0.423
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (15%) [HD]