STRINGSTRING
Solyc09g018890.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc09g018890.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc09g018890.2.1Uncharacterized protein (185 aa)    
Predicted Functional Partners:
Solyc01g095000.2.1
Uncharacterized protein (245 aa)
   
        0.527
Solyc05g009920.2.1
Uncharacterized protein (461 aa)
   
          0.510
Solyc03g025710.2.1
Uncharacterized protein (281 aa)
   
        0.505
Solyc11g065740.1.1
Uncharacterized protein (213 aa)
   
        0.505
Solyc04g009420.2.1
Uncharacterized protein (244 aa)
   
        0.501
Solyc02g014150.2.1
Uncharacterized protein (377 aa)
   
        0.489
Solyc04g080870.1.1
Uncharacterized protein (86 aa)
   
        0.479
Solyc06g009630.1.1
Uncharacterized protein (127 aa)
   
        0.474
Solyc01g109330.2.1
Uncharacterized protein (459 aa)
   
        0.473
Solyc01g079470.2.1
Uncharacterized protein (124 aa)
   
        0.456
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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