STRINGSTRING
Solyc09g031780.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc09g031780.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc09g031780.2.1Uncharacterized protein (1005 aa)    
Predicted Functional Partners:
Solyc11g020300.1.1
Uncharacterized protein (443 aa)
     
 
  0.859
Solyc09g074940.1.1
Uncharacterized protein (1403 aa)
     
 
  0.835
Solyc05g052160.2.1
Translocase of chloroplast ; GTPase involved in protein precursor import into chloroplasts. Seems to recognize chloroplast-destined precursor proteins and regulate their presentation to the translocation channel through GTP hydrolysis (301 aa)
     
 
  0.779
Solyc11g043010.1.1
Uncharacterized protein (728 aa)
       
 
  0.709
Solyc01g111240.2.1
Uncharacterized protein (1341 aa)
       
 
  0.709
Solyc12g013860.1.1
Uncharacterized protein (332 aa)
       
      0.604
Solyc07g063100.2.1
Uncharacterized protein (628 aa)
       
      0.604
CD4B
ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic ; May interact with a ClpP-like protease involved in degradation of denatured proteins in the chloroplast (923 aa)
       
 
  0.565
CD4A
ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4A, chloroplastic ; May interact with a ClpP-like protease involved in degradation of denatured proteins in the chloroplast (926 aa)
       
 
  0.565
Solyc08g081200.2.1
Uncharacterized protein (315 aa)
       
 
  0.562
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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