STRINGSTRING
Solyc09g031930.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc09g031930.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc09g031930.2.1Uncharacterized protein (282 aa)    
Predicted Functional Partners:
Solyc02g078970.2.1
Uncharacterized protein (570 aa)
     
  0.914
Solyc12g008750.1.1
Uncharacterized protein (607 aa)
     
  0.886
Solyc02g085570.2.1
BAC19.11 (558 aa)
     
  0.886
Solyc02g062920.2.1
Uncharacterized protein (560 aa)
     
  0.886
Solyc09g090660.2.1
Uncharacterized protein (521 aa)
     
  0.867
Solyc02g090910.2.1
Uncharacterized protein (376 aa)
     
  0.777
Solyc06g053300.2.1
Uncharacterized protein (373 aa)
     
  0.706
Solyc03g082400.2.1
Uncharacterized protein (439 aa)
     
  0.706
Solyc03g082390.2.1
Uncharacterized protein (385 aa)
     
  0.706
Solyc11g072340.1.1
Uncharacterized protein (354 aa)
     
  0.696
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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