STRINGSTRING
Solyc09g042300.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc09g042300.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc09g042300.1.1Uncharacterized protein (86 aa)    
Predicted Functional Partners:
Solyc12g013630.1.1
Uncharacterized protein (628 aa)
   
  0.875
Solyc11g065360.1.1
Uncharacterized protein (688 aa)
   
  0.875
Solyc07g065780.1.1
Uncharacterized protein (445 aa)
   
  0.875
Solyc07g065770.2.1
Uncharacterized protein (226 aa)
   
  0.875
Solyc06g072090.1.1
Uncharacterized protein (660 aa)
   
  0.875
Solyc07g053300.1.1
Uncharacterized protein (608 aa)
   
  0.848
Solyc12g013640.1.1
Uncharacterized protein (630 aa)
   
  0.842
Solyc05g051540.1.1
Uncharacterized protein (130 aa)
   
  0.827
Solyc03g113080.2.1
Uncharacterized protein (358 aa)
   
  0.827
Solyc03g113070.2.1
Uncharacterized protein (576 aa)
   
  0.827
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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