STRINGSTRING
Solyc09g055470.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc09g055470.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc09g055470.1.1Uncharacterized protein (139 aa)    
Predicted Functional Partners:
Solyc01g097210.2.1
Uncharacterized protein (120 aa)
     
        0.736
Solyc09g082540.2.1
Uncharacterized protein (318 aa)
     
        0.729
Solyc01g097190.2.1
Uncharacterized protein (464 aa)
     
        0.729
Solyc12g056780.1.1
Uncharacterized protein (180 aa)
     
        0.725
Solyc10g081360.1.1
Uncharacterized protein (150 aa)
     
        0.725
Solyc09g075010.2.1
Uncharacterized protein (225 aa)
     
        0.725
DDTFR8
Ripening regulated protein DDTFR8 (179 aa)
     
        0.725
Solyc10g007950.2.1
Uncharacterized protein (857 aa)
     
 
  0.681
Solyc08g076650.2.1
Uncharacterized protein (862 aa)
     
 
  0.681
Solyc07g062140.2.1
Trehalose-phosphate synthase 1 (926 aa)
     
 
  0.681
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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