STRINGSTRING
Solyc09g056160.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc09g056160.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc09g056160.2.1Uncharacterized protein (393 aa)    
Predicted Functional Partners:
Solyc02g079730.2.1
Uncharacterized protein (365 aa)
     
   
  0.562
Solyc01g006490.2.1
Uncharacterized protein (574 aa)
           
  0.491
Solyc08g062190.2.1
Uncharacterized protein (371 aa)
           
  0.489
Solyc07g041280.2.1
Uncharacterized protein (362 aa)
           
  0.489
Solyc07g019530.2.1
Uncharacterized protein (388 aa)
           
  0.480
Solyc03g033560.2.1
Uncharacterized protein (331 aa)
           
  0.459
Solyc12g100200.1.1
Uncharacterized protein (618 aa)
           
  0.440
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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