STRINGSTRING
Solyc09g056170.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc09g056170.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc09g056170.2.1Uncharacterized protein (664 aa)    
Predicted Functional Partners:
Solyc04g006930.2.1
Uncharacterized protein (800 aa)
       
  0.963
Solyc12g056770.1.1
Uncharacterized protein (256 aa)
       
 
  0.941
Solyc09g065950.2.1
Uncharacterized protein ; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments (310 aa)
     
 
  0.909
Solyc01g099720.2.1
Uncharacterized protein ; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments (310 aa)
     
 
  0.909
Solyc01g090450.2.1
Actin-related protein 2/3 complex subunit 5 ; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks (132 aa)
       
 
  0.867
Solyc12g049440.1.1
Uncharacterized protein (217 aa)
       
  0.847
Solyc11g065990.1.1
Uncharacterized protein (377 aa)
       
  0.847
Solyc11g039660.1.1
Uncharacterized protein (51 aa)
       
  0.847
Solyc11g030950.1.1
Uncharacterized protein (59 aa)
       
  0.847
Solyc11g008500.1.1
Uncharacterized protein (360 aa)
       
  0.847
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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