STRINGSTRING
Solyc09g059240.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc09g059240.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc09g059240.2.1Uncharacterized protein (518 aa)    
Predicted Functional Partners:
Solyc03g006550.2.1
Putative geranyllinalool synthase (821 aa)
     
 
  0.909
Solyc10g007930.2.1
Uncharacterized protein (390 aa)
   
     
  0.660
Solyc10g007900.2.1
Uncharacterized protein (390 aa)
   
     
  0.660
Solyc02g069600.2.1
Uncharacterized protein (469 aa)
   
     
  0.643
Solyc04g080650.2.1
Uncharacterized protein (456 aa)
   
     
  0.633
CYP90B3
Cytochrome P450 (491 aa)
   
     
  0.628
SD1
Sterol 22-desaturase ; Required to form the C-22 double bond in the sterol side chain. Possesses in vitro C-22 desaturase activity toward beta- sitosterol to produce stigmasterol. No activity with 24-epi- campesterol (501 aa)
   
     
  0.582
Solyc11g068430.1.1
Putative ferredoxin (124 aa)
     
  0.570
Solyc11g065640.1.1
Uncharacterized protein (216 aa)
     
  0.570
Solyc11g006910.1.1
Uncharacterized protein (125 aa)
     
  0.570
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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