• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Solyc09g059280.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc09g059280.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc09g059280.1.1annotation not available (54 aa)    
Predicted Functional Partners:
Solyc06g010200.2.1
annotation not available (1613 aa)
       
 
  0.910
101257133
annotation not available (447 aa)
       
 
  0.859
101268740
Histone H2A protein 9 (135 aa)
     
 
  0.831
Solyc06g084090.2.1
annotation not available (203 aa)
     
 
  0.831
Solyc10g045400.1.1
Uncharacterized protein; Histone acetyltransferase of the GNAT family 1 (404 aa)
     
 
  0.827
101251929
Uncharacterized protein; Haloacid dehalogenase-like hydrolase family protein (1077 aa)
       
 
  0.827
101247139
annotation not available (216 aa)
       
 
  0.811
101253288
annotation not available (212 aa)
       
 
  0.811
Solyc02g081130.1.1
annotation not available (211 aa)
       
 
  0.811
101264075
PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein (216 aa)
       
 
  0.811
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (11%) [HD]