STRINGSTRING
Solyc09g059570.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc09g059570.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc09g059570.2.1Uncharacterized protein (216 aa)    
Predicted Functional Partners:
Solyc03g007030.2.1
Uncharacterized protein (98 aa)
       
      0.599
Solyc11g013260.1.1
Uncharacterized protein (301 aa)
       
      0.597
Solyc11g010190.1.1
Uncharacterized protein (279 aa)
       
      0.597
Solyc05g051510.2.1
Uncharacterized protein (277 aa)
       
      0.597
Solyc04g078510.2.1
Uncharacterized protein (196 aa)
     
 
  0.567
Solyc02g093010.2.1
Uncharacterized protein (199 aa)
     
 
  0.567
Solyc01g109770.2.1
Uncharacterized protein (194 aa)
     
 
  0.567
Solyc09g091790.2.1
Uncharacterized protein (442 aa)
       
      0.557
Solyc12g056240.1.1
Glutathione peroxidase (170 aa)
     
        0.459
GPXle-2
Glutathione peroxidase (170 aa)
     
        0.459
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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