STRINGSTRING
Solyc09g059960.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc09g059960.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc09g059960.2.1Uncharacterized protein (661 aa)    
Predicted Functional Partners:
Solyc09g059600.2.1
Uncharacterized protein (610 aa)
     
  0.998
Solyc10g007850.2.1
Uncharacterized protein (371 aa)
     
  0.998
Solyc02g067820.2.1
Uncharacterized protein (695 aa)
     
  0.996
Solyc08g080420.2.1
Uncharacterized protein (464 aa)
     
  0.992
Solyc07g014610.2.1
Uncharacterized protein (933 aa)
     
  0.939
Solyc12g042530.1.1
Uncharacterized protein (225 aa)
         
  0.929
Solyc03g117650.2.1
Uncharacterized protein (216 aa)
         
  0.929
cp
Cysteine protease (480 aa)
     
  0.924
Solyc08g079160.2.1
Uncharacterized protein (497 aa)
     
  0.924
vpe
Vacuolar processing enzyme (460 aa)
     
  0.924
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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